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MuhammadMuneeb007 / PhenotypeToGeneDownloaderR

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A comprehensive bioinformatics pipeline for downloading and analyzing genes associated with specific phenotypes from multiple biological databases. This package provides both R scripts for gene retrieval and Python analysis tools for downstream analysis.

bioinformatics r genomics computational-biology gtex phenotypes uniprot opentargets kegg reactome disgenet disease-gene-association hpo omim gene-prioritization literature-mining string-db phenotype-to-gene
  • Updated Apr 28, 2026
  • Python

subhakantrout / rosetta-engine

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AI-powered drug repurposing pipeline that federates live data across 8 biomedical databases in real time, ranks candidates via DeepSeek V4 LLM analysis, and visualizes target–drug–protein networks in an interactive 3D knowledge graph.

python open-source bioinformatics ai pubmed knowledge-graph drug-discovery drug-repurposing clinical-trials uniprot chembl openfda translational-research fastapi biomedical-research streamlit open-targets deepseek string-db neglected-diseases
  • Updated Jun 21, 2026
  • Python

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